Show pageOld revisionsBacklinksBack to top This page is read only. You can view the source, but not change it. Ask your administrator if you think this is wrong. CKG Edit ==== Note ==== Each tool becomes available by 'module load <tool>/<version>'. Those who want to use these tools, contact (e-mail: ) to enable modules available. <code> module avail # List all available modules. module list # Modules loaded at present. # Without module load, blastn is not available. blastn -version #-bash: blastn: command not found # Enable blast+, version 2.10.0 module load blast+/2.10.0 # After module load, blastn becomes available. blastn -version #blastn: 2.10.0+ # Disable a tool module unload blast+/2.10.0 # Disable all presently loaded modules module purge </code> ==== aragorn/1.2.38 ==== ==== arb/6.0.6 ==== ==== ascp/3.9.9 ==== ==== bamtools/2.5.1 ==== ==== barrnap/0.9 ==== ==== bbtools/38.86 ==== ==== bcftools/1.10.2 ==== ==== beagle-lib/3.1.2 ==== ==== bedops/2.4.38 ==== ==== bedtools/2.29.2 ==== ==== blast/2.2.26 ==== ==== blast+/2.10.0(default) ==== ==== blast+/2.9.0 ==== ==== boost/1.73.0 ==== ==== bowtie2/2.4.1 ==== ==== bwa/0.7.17 ==== ==== canu/1.9 ==== ==== canu/2.0 ==== ==== cdhit/4.8.1 ==== ==== checkm/1.1.2 ==== ==== circos/0.69-9 ==== ==== cpanm/1.7044 ==== ==== cufflinks/2.2.1 ==== ==== cutadapt/2.10 ==== ==== diamond/0.9.35 ==== ==== eggnog-mapper/2.0.1 ==== ==== EMBOSS/6.6.0 ==== ==== FastANI/1.3 ==== ==== fastqc/0.11.9 ==== ==== fasttree/2.1.11 ==== ==== Gblocks/0.91b ==== ==== go/1.14.4 ==== ==== gtdbtk/1.2.0 ==== ==== hmmer/2.3.2 ==== ==== hmmer/3.1b1 ==== ==== hmmer/3.1b2 ==== ==== hmmer/3.2.1 ==== ==== hmmer/3.3 ==== ==== htslib/1.10.2 ==== ==== infernal/1.1.3 ==== ==== jdk/11.28 ==== ==== jdk/14.0.1 ==== ==== jdk/8.0_41 ==== ==== jellyfish/2.3.0 ==== ==== kaiju/1.7.3 ==== ==== krona/2.7.1 ==== ==== ksnp/3.1.2 ==== ==== mafft/7.470 ==== ==== mash/2.2 ==== ==== MCL/14-137 ==== ==== MinCED/0.4.2 ==== ==== miniconda/4.8.3 ==== ==== minimap2/2.17 ==== ==== mothur/1.44.1 ==== ==== MUMmer/3.23 ==== ==== muscle/3.8.31 ==== ==== ncftp/3.2.6 ==== ==== paml/4.9j ==== ==== parallel/20200622 ==== ==== phylip/3.697 ==== ==== phyml/3.3.20190909 ==== ==== picard/2.23.1 ==== ==== pilon/1.23 ==== ==== pplacer/1.1.alpha17 ==== ==== prank/170427 ==== ==== prinseq/0.20.4 ==== ==== prodigal/2.6.3 ==== ==== prokka/1.14.6 ==== ==== pyani/0.2.10 ==== ==== python/3.7.6.bio ==== ==== quast/5.1.0rc1 ==== ==== racon/1.4.16 ==== ==== roary/1.7.7 ==== ==== RSEM/1.3.3 ==== ==== salmon/1.2.1 ==== ==== samtools/1.10.2 ==== ==== seqkit/0.12.1 ==== ==== seqtk/1.3 ==== ==== SINA/1.6.1 ==== ==== SPAdes/3.13.2 ==== ==== SPAdes/3.14.1 ==== ==== sratoolkit/2.10.7 ==== ==== ssu-align/0.1.1 ==== ==== tbl2asn/3.10.0 ==== ==== tophat/2.1.1 ==== ==== TransDecoder/5.5.0 ==== ==== trf/4.09 ==== ==== trinityrnaseq/2.11.0 ==== ==== tRNAscan-SE/2.0.5 ==== ==== Unicycler/0.4.9b ==== ==== vcftools/0.1.17 ==== Toggle WYSIWYG editor namespace/doc-mach/installed-software.txt Last modified: 2020/07/23 09:22by mickey